NP_611900.1 has 587 amino acids
Query: NDNF [M=127]
Accession: PF10179.13
Description: Neuron-derived neurotrophic factor, first Fn(III) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.3e-37 113.6 0.0 1.1e-34 105.5 0.0 2.5 2 NP_611900.1
Domain annotation for each sequence (and alignments):
>> NP_611900.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 105.5 0.0 1.1e-34 1.1e-34 1 126 [. 208 332 .. 208 333 .. 0.97
2 ! 5.7 0.0 0.00082 0.00082 2 25 .. 473 493 .. 472 536 .. 0.80
Alignments for each domain:
== domain 1 score: 105.5 bits; conditional E-value: 1.1e-34
NDNF 1 vtlkWkpsksvldkhaveYClvvnreh......nykslCaaeeeirkekqeekeskskkeavlellkeqelkkerkleekessadlqivCvgkktvqt 92
+++kW++sk +d h ++YClv++r + ++++C+a+++++++++ +++++++ le ++ +++++er+l+++ ++++ivC+gk+++q+
NP_611900.1 208 MIVKWERSK--FDFHVMHYCLVIQRLSmdtprmIFTNFCQAVSAYTDQQP--MTPSCAAGGPLEGIWGAPPQRERRLNPR---QNVHIVCTGKRRQQL 298
689******..**************99999*99************99988..999*************************...*************** PP
NDNF 93 vseLkpdtqYyfdvFavdqkrntstaylgtfaet 126
+++L+p+++Y++d+F+++q r+++t+ l++++++
NP_611900.1 299 LRRLLPRSSYHLDLFGIHQGRQNLTLRLASSQVN 332
*****************************99976 PP
== domain 2 score: 5.7 bits; conditional E-value: 0.00082
NDNF 2 tlkWkpsksvldkhaveYClvvnr 25
t++W+ s+ d+++ YC++v +
NP_611900.1 473 TIAWNGSP---DERELSYCIIVFN 493
89******...*********9954 PP
Or compare NP_611900.1 to CDD or PaperBLAST