NP_765987.2 has 568 amino acids
Query: NDNF [M=127]
Accession: PF10179.13
Description: Neuron-derived neurotrophic factor, first Fn(III) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-45 139.2 0.0 5.4e-40 122.6 0.0 2.5 2 NP_765987.2
Domain annotation for each sequence (and alignments):
>> NP_765987.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 122.6 0.0 5.4e-40 5.4e-40 1 126 [. 192 334 .. 192 335 .. 0.87
2 ! 14.0 0.1 2.1e-06 2.1e-06 87 125 .. 526 563 .. 469 565 .. 0.70
Alignments for each domain:
== domain 1 score: 122.6 bits; conditional E-value: 5.4e-40
NDNF 1 vtlkWkpsksv.ldkhaveYClvvnrehnykslCaaeeeirkekq......eekeskskkeavlellkeqelkkerkleekes.....s......adl 80
vtl+Wkps+++ k+++eYC+v+n+ehn+kslCaae++++ + + + + +++a++ + + +l k+r+l k s + d+
NP_765987.2 192 VTLAWKPSPTAsILKQPIEYCVVINKEHNFKSLCAAETKMNADDAfmvapkPGLDFNPFDFAHFGFPTD-NLGKDRSLLAKPSpkvgrHvywrpkVDI 288
79**********9**************************94444456999899999**********665.5566666666656566651666677*** PP
NDNF 81 qivCvgkktvqtvseLkpdtqYyfdvFavdqkrntstaylgtfaet 126
q++C+g+k+ +tvs+LkpdtqYyfdvF v++++n stay+g+f++t
NP_765987.2 289 QKICIGNKNIFTVSDLKPDTQYYFDVFMVNTNTNMSTAYVGAFVRT 334
*******************************************998 PP
== domain 2 score: 14.0 bits; conditional E-value: 2.1e-06
NDNF 87 kktvqtvseLkpdtqYyfdvFavdqkrntstaylgtfae 125
t t+++L+p ++Y +dv++v + + s+ y +++
NP_765987.2 526 AVTTETIRDLQPGKSYLLDVYVVGH-GGHSVKYQSKIVK 563
45788******************75.4667777666655 PP
Or compare NP_765987.2 to CDD or PaperBLAST