PaperBLAST – Find papers about a protein or its homologs

 

Align D4AE02 to PF10239 (DUF2465)

D4AE02 has 434 amino acids

Query:       DUF2465  [M=302]
Accession:   PF10239.13
Description: Protein of unknown function (DUF2465)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   2.2e-133  430.3   0.5   2.6e-133  430.1   0.5    1.0  1  D4AE02    


Domain annotation for each sequence (and alignments):
>> D4AE02  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  430.1   0.5  2.6e-133  2.6e-133       2     302 .]      35     330 ..      34     330 .. 0.99

  Alignments for each domain:
  == domain 1  score: 430.1 bits;  conditional E-value: 2.6e-133
  DUF2465   2 lskaleeglsspeftelvawLaselkkllkleesvnsisseddaesfllelsslLkelgcpykalvsgeveerlkekedrlkLleyLvsElqAarileskkp 103
              lska+e+glsspef+el+ wL s++k+l++lees++s+ ++dd e f+le+s++Lke++cpy+ lvsg+++erl++k+d+lkLl +L++ElqA +il++k  
   D4AE02  35 LSKAAEGGLSSPEFSELCIWLGSQIKSLCNLEESITSA-GRDDLEGFQLEISGFLKEMACPYSVLVSGDIKERLTTKDDCLKLLLFLSTELQALQILQKK-- 133
              89**********************************96.9************************************************************.. PP

  DUF2465 104 eekkkekskkesetakelkeilktLglskppknitakqlfskiekkvkellkkvpeklvgkpllkksltseqwekLekinkeLseeYelRrqmLlkRldvTv 205
               ++k+++ +k+se+++e+++i+ +Lg++k ++++++  l+s++e+kvk++l+kv++++vgkpllk +ltseq ekLe+in++Ls eYe+Rr+mL+kRldvTv
   D4AE02 134 -KHKNSQLDKNSEICQEVQAICDALGVPK-SDTSDIPLLLSHVESKVKDILSKVQKSHVGKPLLKVDLTSEQAEKLERINDALSCEYECRRRMLMKRLDVTV 233
              .8899999********************9.9*********************************************************************** PP

  DUF2465 206 qSFkWsdrakkkedeiakvyqpkrkeLekesdvslahlLaAredlakiektssasvrkktksainkvliGrVPDRGGrpseqeapppeMPswqkrqe 302
              qSF+Wsdrak+k+d+ia++yqpkr +L+++++v+lahlLaAredl+ki++tss+ +r+kt++ainkvl+GrVPDRGGrp+e+e+pppeMP+wqkrqe
   D4AE02 234 QSFGWSDRAKAKTDNIARIYQPKRYALSPKTTVTLAHLLAAREDLSKIIRTSSGISREKTACAINKVLMGRVPDRGGRPNEIEPPPPEMPPWQKRQE 330
              ***********************************************************************************************96 PP



Or compare D4AE02 to CDD or PaperBLAST