PaperBLAST – Find papers about a protein or its homologs

 

Align XP_752402.2 to PF10300 (Iml2-TPR_39)

XP_752402.2 has 725 amino acids

Query:       Iml2-TPR_39  [M=467]
Accession:   PF10300.13
Description: Iml2/Tetratricopeptide repeat protein 39
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   8.2e-160  518.5   0.0     1e-159  518.2   0.0    1.1  1  XP_752402.2  


Domain annotation for each sequence (and alignments):
>> XP_752402.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  518.2   0.0    1e-159    1e-159       1     467 []      35     601 ..      35     601 .. 0.95

  Alignments for each domain:
  == domain 1  score: 518.2 bits;  conditional E-value: 1e-159
  Iml2-TPR_39   1 laaldlfLnnkfeeaeellkeaskeSmyhalgrsvvafleAvltfepedikkasealkeaekvceksrkkaqvvevskqst.sdslyeeeleaevcya 97 
                  ++a +l+Ln+++++ae+ l+  +++S +h+lgr+vvaf++A+l+fe++ +++ase+l+eae+ ++ ++++aq+++  +++t    +y +++e+++c+a
  XP_752402.2  35 MRAATLILNDDVDGAEAGLA--EGTSAFHNLGRGVVAFIRATLGFEQDIMRQASERLNEAETSASVDQHRAQHNS-YAPNTyHSPMYLPGTEFALCQA 129
                  6799***************6..799**************************************************.666665668************* PP

  Iml2-TPR_39  98 ealLlkAaltfvdeslvefiKgglklrkaYqiykeiqkllkkleekkek................................................. 146
                   a+L++A++++++esl+e+iK++++lrkaY ++++i k+++k+ e+++                                                  
  XP_752402.2 130 IAQLMSAIVGVLNESLTESIKAFYRLRKAYITLDAILKMEQKYMEESRAatlvesttsgsvpsslrhsssnlhsssssissakgkeaaadtlaapsnd 227
                  ******************************************99998889************************************************ PP

  Iml2-TPR_39 147 .................................eeeesslseekn....qeeidefiesGvklglGifnlllSllPpkilklLevvGFsGdreeGLrl 207
                                                           ++++    q++id f++sG ++++G++ ll+S++Pp+++klL+++GF+Gd+e+GL++
  XP_752402.2 228 tdvqerladlnlsgepavaedpgqtptpintdiL------DHDPDsdifQNQIDVFVHSGSNFCFGVLLLLISMVPPSFSKLLSIIGFHGDKERGLKM 319
                  *********************9999987643321......22333457788*********************************************** PP

  Iml2-TPR_39 208 LweaaksknlraalalltLlaYytvvvqvlgi...e......e.geapleeaeelLkklrkryPkgallllfeariellkgnldeAlelleeliesqs 295
                  Lw+a+k +nl + +a++++l Yy+++v++++i   +      + +++p++++e lL+k+r+r+Pk++l+ll+e+r+  +++nld+Alell+   e++s
  XP_752402.2 320 LWQASKFHNLIGGIAAFAILGYYNGFVRYCDImpdSipgkdgDvQGYPQKRLELLLAKMRERFPKSQLWLLEESRMSGANKNLDRALELLC--GEERS 415
                  ********************************8751666665379*********************************************9..9**** PP

  Iml2-TPR_39 296 elkqvhhlcyfelalclvflhkykqaansallLvkeskwSkalYtYlkaacllelyke......eekkeakekavellrevpklkqkiag..kslple 385
                   lkqv++l++fe++l++++lhky+ +a+s+l++v++++wS++lY+Y++++c+l+ly++       ++++++e a++++r +p+++ k+++  ++lp++
  XP_752402.2 416 PLKQVEALRVFERSLNAMYLHKYELCADSFLECVDLNSWSRSLYYYIAGSCHLSLYRDaketdsAKAAKHAELAEKYFRMAPTVAGKKRFmaRQLPFD 513
                  **********************************************************9999997777788*************************** PP

  Iml2-TPR_39 386 kFaarKvqrfkarak......vdavlvvpllEliYvwngfsrmgkkelltesvlkllekaekanke.seaeeDdksllkLLkglvlrnl 467
                  +F+arK ++++arak      vdav+v+p++E+i++wng+srm++++l+ es++kl++++++an++ s++++++k++lkLL+++v+r+l
  XP_752402.2 514 VFVARKFAKWEARAKewkvslVDAVGVDPIEEMIFFWNGHSRMTDEQLQ-ESLQKLAWSESSANTTwSREGPEEKAILKLLRAAVHRSL 601
                  *************999*********************************.**********9***99999******************87 PP



Or compare XP_752402.2 to CDD or PaperBLAST