NP_071348.3 has 1953 amino acids
Query: DUF2428 [M=259]
Accession: PF10350.13
Description: THADA/TRM732, DUF2428
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-89 286.4 0.0 3.8e-89 284.5 0.0 2.1 1 NP_071348.3
Domain annotation for each sequence (and alignments):
>> NP_071348.3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 284.5 0.0 3.8e-89 3.8e-89 2 259 .] 948 1248 .. 947 1248 .. 0.91
Alignments for each domain:
== domain 1 score: 284.5 bits; conditional E-value: 3.8e-89
DUF2428 2 llerllelceriwsvvlpvlsddspeghlpedledeeee.sk.se........................................eeeeee..... 50
++e+ll +++r++ vv+pv++++speg +p+d+++e+++ + + e
NP_071348.3 948 VVEKLLLMSYRLSTVVSPVIQSSSPEGLIPMDTDSESASrLQmILneiqprdtndyfnqakilkehdsfdmkdlnasvvnidtstE----Ikgkev 1039
689*******************************9888766655269********9999999999888888777666655543321....023456 PP
DUF2428 51 ....ltaqvvlscsWralkeaslllgtivekvpletekskedsllskeqlekigelffeqLlelrHrGAfetvyvgftalcqrllrskdselsqlp 142
+taq+vl+c+Wr++ke++lllg +++ +p+++ ++++d ll++eq+++ig++f+++Ll++rHrGAfe +y gf++l++ l r+++ +l++lp
NP_071348.3 1040 ktcdVTAQMVLVCCWRSMKEVALLLGMLCQLLPMQPVPESSDGLLTVEQVKEIGDYFKQHLLQSRHRGAFELAYTGFVKLTEVLNRCPNVSLQKLP 1135
6688******************************************************************************************** PP
DUF2428 143 eqwleelleeik....skslsitRRSAGlPflilailssepksskkklLkkamkeLleiakkpaeseeeseseeksdlpqvhalNiLraifrdskL 234
eqwl ++leeik s++l++tRRSAG+Pf+i+a+l+sepk+++ +lLk +mkeL+++a +++ +s++pqvhalNiLra+frd++L
NP_071348.3 1136 EQWLWSVLEEIKcsdpSSKLCATRRSAGIPFYIQALLASEPKKGRMDLLKITMKELISLAGP------TDDI--QSTVPQVHALNILRALFRDTRL 1223
*******************************************999**************94......3333..468******************* PP
DUF2428 235 geevspyvaeglelaiegfsspvWa 259
ge++ pyva+g ++ai gf+spvWa
NP_071348.3 1224 GENIIPYVADGAKAAILGFTSPVWA 1248
************************7 PP
Or compare NP_071348.3 to CDD or PaperBLAST