PaperBLAST – Find papers about a protein or its homologs

 

Align NP_001190847.2 to PF10354 (BMT5-like)

NP_001190847.2 has 209 amino acids

Query:       BMT5-like  [M=168]
Accession:   PF10354.13
Description: rRNA (uridine-N3-)-methyltransferase BTM5-like
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-57  181.1   0.0    1.3e-57  180.9   0.0    1.0  1  NP_001190847.2  


Domain annotation for each sequence (and alignments):
>> NP_001190847.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.9   0.0   1.3e-57   1.3e-57       1     168 []      18     185 ..      18     185 .. 0.95

  Alignments for each domain:
  == domain 1  score: 180.9 bits;  conditional E-value: 1.3e-57
       BMT5-like   1 LlvGeGdfSFslslakalgsaeeealvatsldseeeleekypeaeenleeLeeegvkvlfgvDatklekeeklkkkkfdriiFnFPhvGgkskdv 95 
                     LlvGeG+fSFsl+la+a+gsa +  ++atsldse+el+ ky +a +n++ L++ g+ + ++vD+++++ +++l+ +++dri+FnFPh+G +   +
  NP_001190847.2  18 LLVGEGNFSFSLCLASAFGSAMN--ITATSLDSEDELSIKYMDAVDNINILKRYGCDIQHEVDVHTMSFDNSLSLQRYDRIVFNFPHAGSRFFGR 110
                     8********************98..********************************************99*****************9877544 PP

       BMT5-like  96 er...nirknqeLlkkFfksakellkeegeilvtlkegeppydswnieelakeaglklersvkFdaeaypgYkhkr 168
                     e     i++++eL+++F+++ake+l+e+gei++t+k++ p +++w i++l+k +glkl ++ kF+ ++ypgY  kr
  NP_001190847.2 111 ELssrAIESHKELVRGFLENAKEMLEEDGEIHITHKTTYP-FSDWGIKKLGKGEGLKLLKKSKFELSHYPGYITKR 185
                     43455**********************************7.*******************************8876 PP



Or compare NP_001190847.2 to CDD or PaperBLAST