NP_001002480.1 has 164 amino acids
Query: UPF0556 [M=123]
Accession: PF10572.13
Description: UPF0556 domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-57 178.2 0.8 3.6e-57 177.9 0.8 1.1 1 NP_001002480.1
Domain annotation for each sequence (and alignments):
>> NP_001002480.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 177.9 0.8 3.6e-57 3.6e-57 1 122 [. 34 161 .. 34 162 .. 0.98
Alignments for each domain:
== domain 1 score: 177.9 bits; conditional E-value: 3.6e-57
UPF0556 1 fdvkPgGevhsvsekleevkCtftyacqGGTnEeWelslalsedkkkysCsveRpegkSYLfftqfklelkgakveeaeay......gesdkklk 89
fdvkPgG+v+++s kl+++kCtftyacqGGTnE+W++s++ls+d++++sCsv+Rp+gkSYLfftqfk+e+kgak+e+a+ay g++d+ lk
NP_001002480.1 34 FDVKPGGVVQTFSAKLKKYKCTFTYACQGGTNEQWQMSVGLSDDEQMFSCSVWRPQGKSYLFFTQFKAEIKGAKIEYATAYsqtavgGQRDVALK 128
8**************************************************************************************9******* PP
UPF0556 90 seeyevdksevsqkegkfkaelakltvsaekkk 122
+eey v++s+v+q++gkf++el+kltv+ + ++
NP_001002480.1 129 EEEYIVSESAVTQRDGKFHSELSKLTVIGRIRH 161
***************************998776 PP
Or compare NP_001002480.1 to CDD or PaperBLAST