NP_001006342.2 has 167 amino acids
Query: UPF0556 [M=123]
Accession: PF10572.13
Description: UPF0556 domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-54 169.1 0.1 2.3e-54 168.9 0.1 1.1 1 NP_001006342.2
Domain annotation for each sequence (and alignments):
>> NP_001006342.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 168.9 0.1 2.3e-54 2.3e-54 1 122 [. 37 164 .. 37 165 .. 0.98
Alignments for each domain:
== domain 1 score: 168.9 bits; conditional E-value: 2.3e-54
UPF0556 1 fdvkPgGevhsvsekleevkCtftyacqGGTnEeWelslalsedkkkysCsveRpegkSYLfftqfklelkgakveeaeay......gesdkklk 89
fdv+PgGevh +s++l++++Ctfty++qGGTnE+W++++++sed+ +sCsv+Rp+gkSYLfftqfk+e+kgak+e+a+ay +sd +lk
NP_001006342.2 37 FDVRPGGEVHFFSRSLGDYTCTFTYSAQGGTNEQWQMNIGVSEDNLLFSCSVWRPQGKSYLFFTQFKAEVKGAKIEYAMAYsqaavgAQSDIPLK 131
8************************************************************************************99899***** PP
UPF0556 90 seeyevdksevsqkegkfkaelakltvsaekkk 122
+ee+e+++++vs++egkf+ el+kl+++a++ +
NP_001006342.2 132 QEEFEITETTVSHREGKFRFELSKLVIVAKTPH 164
***************************999876 PP
Or compare NP_001006342.2 to CDD or PaperBLAST