NP_061980.1 has 173 amino acids
Query: UPF0556 [M=123]
Accession: PF10572.13
Description: UPF0556 domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.7e-54 166.8 0.1 1.2e-53 166.6 0.1 1.1 1 NP_061980.1
Domain annotation for each sequence (and alignments):
>> NP_061980.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 166.6 0.1 1.2e-53 1.2e-53 1 122 [. 40 170 .. 40 171 .. 0.97
Alignments for each domain:
== domain 1 score: 166.6 bits; conditional E-value: 1.2e-53
UPF0556 1 fdvkPgGevhsvsek...leevkCtftyacqGGTnEeWelslalsedkkkysCsveRpegkSYLfftqfklelkgakveeaeay......gesdkklk 89
fdv+PgG+vhs+s++ ++++C ftya+qGGTnE+W++sl++sed+++++C+++Rp+gkSYL+ftqfk+e++ga++e+a+ay +esd++lk
NP_061980.1 40 FDVRPGGVVHSFSHNvgpGDKYTCMFTYASQGGTNEQWQMSLGTSEDHQHFTCTIWRPQGKSYLYFTQFKAEVRGAEIEYAMAYskaafeRESDVPLK 137
8**************887778********************************************************************999****** PP
UPF0556 90 seeyevdksevsqkegkfkaelakltvsaekkk 122
+ee+ev+k++v+++ g fkael+kl+++a++++
NP_061980.1 138 TEEFEVTKTAVAHRPGAFKAELSKLVIVAKASR 170
***************************998876 PP
Or compare NP_061980.1 to CDD or PaperBLAST