PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS6876433 to PF10615 (DUF2470)

VIMSS6876433 has 94 amino acids

Query:       DUF2470  [M=77]
Accession:   PF10615.12
Description: Domain of unknown function (DUF2470)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.3e-29   87.4   0.2      5e-29   87.2   0.2    1.1  1  VIMSS6876433  


Domain annotation for each sequence (and alignments):
>> VIMSS6876433  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.2   0.2     5e-29     5e-29       1      77 []      10      85 ..      10      85 .. 0.94

  Alignments for each domain:
  == domain 1  score: 87.2 bits;  conditional E-value: 5e-29
                  HHHHHHHHHHH-HHHHHHHHHHCST-TTCCEEEEEEE-SSEEEEEEC.....CEEEEEE-SS---SCCHHHHHHHHH CS
       DUF2470  1 sariiaHMNaDHaddlllylrhygkvkeakearmtdidldgltlrltakagsektvripFdpplkswaearerLveM 77
                  s+ri++HMN+DHad+++ly++ +g+v++a +a+m++id++g++l++ +++g++++vri+Fd+ l ++++a+++L++M
  VIMSS6876433 10 SSRICQHMNDDHADAIVLYAKTFGGVTDAIAAKMLSIDAQGMDLTA-QANGETVPVRIQFDRVLADAEDAHQTLIAM 85
                  68*******************************************4.455559***********************9 PP



Or compare VIMSS6876433 to CDD or PaperBLAST