PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS875477 to PF10615 (DUF2470)

VIMSS875477 has 243 amino acids

Query:       DUF2470  [M=77]
Accession:   PF10615.12
Description: Domain of unknown function (DUF2470)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-20   60.0   0.0    2.6e-20   59.3   0.0    1.4  1  VIMSS875477  


Domain annotation for each sequence (and alignments):
>> VIMSS875477  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.3   0.0   2.6e-20   2.6e-20       4      75 ..     162     227 ..     159     229 .. 0.93

  Alignments for each domain:
  == domain 1  score: 59.3 bits;  conditional E-value: 2.6e-20
                  HHHHHHHH-HHHHHHHHHHCST-TTCCEEEEEEE-SSEEEEEEC.....CEEEEEE-SS---SCCHHHHHHH CS
      DUF2470   4 iiaHMNaDHaddlllylrhygkvkeakearmtdidldgltlrltakagsektvripFdpplkswaearerLv 75 
                  +++HMN+DHa+++++y++  g  +++++a+m +id++g++lr++     ++ + +pF+ p++++ ++re+Lv
  VIMSS875477 162 MVEHMNSDHAKAIAHYVQLTG-LPDNAPAQMAGIDTEGMHLRIG-----QALYWLPFQAPCNTPTQVREALV 227
                  789*****************7.7899****************54.....569*******************9 PP



Or compare VIMSS875477 to CDD or PaperBLAST