biolip::3swjA has 246 amino acids
Query: DUF2470 [M=77]
Accession: PF10615.12
Description: Domain of unknown function (DUF2470)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-09 24.6 0.0 3.3e-09 23.7 0.0 1.4 1 biolip::3swjA
Domain annotation for each sequence (and alignments):
>> biolip::3swjA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.7 0.0 3.3e-09 3.3e-09 3 62 .. 4 55 .. 3 68 .. 0.80
Alignments for each domain:
== domain 1 score: 23.7 bits; conditional E-value: 3.3e-09
HHHHHHHHH-HHHHHHHHHHCST-TTCCEEEEEEE-SSEEEEEEC.....CEEEEEE-SS CS
DUF2470 3 riiaHMNaDHaddlllylrhygkvkeakearmtdidldgltlrltakagsektvripFdp 62
ii+HMN+ H+ l+++++ +g+ ++ + ++++d +gl+l + +r+ F++
biolip::3swjA 4 SIISHMNDHHKSNLVDLCKKFGGIEQ-VQVFLKSVDFNGLDLVYE-------NLRVEFPK 55
79********************8755.5555**********9942.......45555554 PP
Or compare biolip::3swjA to CDD or PaperBLAST