PaperBLAST – Find papers about a protein or its homologs

 

Align XP_012838088.1 to PF10674 (Ycf54)

XP_012838088.1 has 214 amino acids

Query:       Ycf54  [M=92]
Accession:   PF10674.13
Description: Ycf54 protein
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-40  123.9   1.5      2e-40  123.3   1.5    1.3  1  XP_012838088.1  


Domain annotation for each sequence (and alignments):
>> XP_012838088.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.3   1.5     2e-40     2e-40       1      92 []      79     169 ..      79     169 .. 0.98

  Alignments for each domain:
  == domain 1  score: 123.3 bits;  conditional E-value: 2e-40
           Ycf54   1 ktYyfvvasakfllee.epleevLkerarnykeknkeidfwlvkePaFleapelaeikaklpkpaaAivstdkqfitflklrLeyvlkgefea 92 
                     k+Y+f+va+akf+l+e e+++e+L er r+y eknke dfwlv eP+Fl++  +++i+++l++pa+A+vst++++itf+klrL++vl+++fea
  XP_012838088.1  79 KKYHFLVANAKFMLDEeEHFQEQLAERLRYYGEKNKELDFWLVIEPKFLDK--FPNITKRLKRPAVALVSTNATWITFMKLRLDRVLQESFEA 169
                     58************9989********************************9..**************************************97 PP



Or compare XP_012838088.1 to CDD or PaperBLAST