PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS71489 to PF10697 (DUF2502)

VIMSS71489 has 98 amino acids

Query:       DUF2502  [M=90]
Accession:   PF10697.13
Description: Protein of unknown function (DUF2502)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.7e-18   52.3  18.0    6.6e-18   51.1  18.0    1.7  1  VIMSS71489  


Domain annotation for each sequence (and alignments):
>> VIMSS71489  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.1  18.0   6.6e-18   6.6e-18       1      89 [.      25      96 ..      25      97 .. 0.76

  Alignments for each domain:
  == domain 1  score: 51.1 bits;  conditional E-value: 6.6e-18
     DUF2502  1 siellpsiklqiGdqdkrGnywdGydwrdrqywknhrganlgernergyewdgrrwqdrgwdkkkayeregregyrerdkhrgkngqkk 89
                +i+l+ps+klqiGd+d+rG+ywdG++wrd+ +wk+h            yew+g+rw+ +g      ++++      ++d+h+g++ +k+
  VIMSS71489 25 EITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH------------YEWRGNRWHPHGPPPPPRHHKKA-----HHDHHGGHGPGKH 96
                699*********************************............********777754333332222.....2455555554454 PP



Or compare VIMSS71489 to CDD or PaperBLAST