VIMSS35554 has 178 amino acids
Query: BPA [M=160]
Accession: PF10759.13
Description: Bacterial proteasome activator
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-83 263.6 1.8 3e-83 263.3 1.8 1.0 1 VIMSS35554
Domain annotation for each sequence (and alignments):
>> VIMSS35554
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 263.3 1.8 3e-83 3e-83 6 144 .. 32 171 .. 28 178 .] 0.93
Alignments for each domain:
== domain 1 score: 263.3 bits; conditional E-value: 3e-83
BPA 6 deeeeeeeevadlveqPakvmrigtmikqlleevraapldeasrkrlkeihersikeleeglaPelveelerlslpftedatPsdaelriaqaqlvGWl 104
+e++++e++++dlveqPakvmrigtmikqlleevraapldeasr+rl++ih++si+ele+glaPel+eel+rl+lpf+eda+PsdaelriaqaqlvGWl
VIMSS35554 32 QENDSDESSLTDLVEQPAKVMRIGTMIKQLLEEVRAAPLDEASRNRLRDIHATSIRELEDGLAPELREELDRLTLPFNEDAVPSDAELRIAQAQLVGWL 130
67888999******************************************************************************************* PP
BPA 105 eGlfhGiqtalvaqqmaaraqleqlrr.alPpggeaaeeeg 144
eGlfhGiqtal+aqqmaaraql+q+r+ alPpg ++ ++g
VIMSS35554 131 EGLFHGIQTALFAQQMAARAQLQQMRQgALPPGVGKSGQHG 171
***************************99****55544444 PP
Or compare VIMSS35554 to CDD or PaperBLAST