PaperBLAST – Find papers about a protein or its homologs

 

Align BRENDA::A8FGH3 to PF10776 (DUF2600)

BRENDA::A8FGH3 has 359 amino acids

Query:       DUF2600  [M=328]
Accession:   PF10776.13
Description: Protein of unknown function (DUF2600)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   9.2e-159  513.6   5.5     1e-158  513.4   5.5    1.0  1  BRENDA::A8FGH3  


Domain annotation for each sequence (and alignments):
>> BRENDA::A8FGH3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  513.4   5.5    1e-158    1e-158       1     328 []      20     348 ..      20     348 .. 1.00

  Alignments for each domain:
  == domain 1  score: 513.4 bits;  conditional E-value: 1e-158
         DUF2600   1 PevkreleewrekaeaipdeeLrkqAlasieekkfhceggsvyallagekkkelirlivayqtisdYLdnlcdrstsldekdfrqLhqalldalt 95 
                     P v++el++w+++ae i++eeLr+qAlasi++k+fhcegg++++llag+ k+++i++ivayqtisdYLdnlcdrstsld+kdf++Lhqa+ dal+
  BRENDA::A8FGH3  20 PLVHQELKKWQAHAEMIENEELRTQALASISSKTFHCEGGGILSLLAGDAKETCIEFIVAYQTISDYLDNLCDRSTSLDPKDFHMLHQAMRDALD 114
                     99********************************************************************************************* PP

         DUF2600  96 peaelsdYYkyreeqdDggYLaaLvktCqevlkklpsyelvrekllelaelysdLqvykhvkeeereerLkewferhkkklpelewyEfaaatgs 190
                     ++ael+ YY++r++q+D+gYL+aLv+tCq+vl++l++y +++++l++l+++ysdLqv+khv ++er++rL++wf++++k+lp++ewyEf+a++gs
  BRENDA::A8FGH3 115 IHAELKPYYQFRDDQEDHGYLHALVRTCQDVLSRLKHYPIIQPYLHTLCDYYSDLQVHKHVVPHERVPRLESWFRQYEKDLPKMEWYEFSACAGS 209
                     *********************************************************************************************** PP

         DUF2600 191 tLgifaLlalalepdlteedaekikeaYfpwiqglhiLLdyfidqeeDreegdlnFvayYedeeellerlklfvekalesvaklpdkkfhrlvve 285
                     tLgif+L+a+al+pd+te++a++i+e+Yfp+iqglhiLLdy+idqeeDr +gdlnF++yY++++e+++rl++f+eka+e+++ +p+++fh+l+++
  BRENDA::A8FGH3 210 TLGIFCLVAYALQPDFTETQAKQIYESYFPYIQGLHILLDYLIDQEEDRLGGDLNFCSYYASHHEMMNRLQHFIEKADEQLKGIPHENFHKLINR 304
                     *********************************************************************************************** PP

         DUF2600 286 gLlalYlsdekv.kqkelkklakrllkagglkalllylnsrllr 328
                     gLla+Ylsdekv +qke++klakrl++++g++++++y+n r++r
  BRENDA::A8FGH3 305 GLLAVYLSDEKVtAQKEMNKLAKRLIRSSGKTSFFFYINGRAYR 348
                     ***************************************99987 PP



Or compare BRENDA::A8FGH3 to CDD or PaperBLAST