VIMSS305301 has 239 amino acids
Query: DUF2884 [M=228]
Accession: PF11101.12
Description: Protein of unknown function (DUF2884)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4e-25 74.9 1.0 4.5e-25 74.7 1.0 1.0 1 VIMSS305301
Domain annotation for each sequence (and alignments):
>> VIMSS305301
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 74.7 1.0 4.5e-25 4.5e-25 1 215 [. 24 234 .. 24 239 .] 0.95
Alignments for each domain:
== domain 1 score: 74.7 bits; conditional E-value: 4.5e-25
DUF2884 1 CevslnydvtveekklevsdagkekvrieedgqLfvdgkkvkLnadqqkaleqyseqvsqlvPevvalandgvklandavdevltsllgdaskafekl 98
C+v+ + dv v++++++v+ + + + +i+ dg+++ +gk+ +Lna q++ ++y++++++++P + + a+ v+ a a+d+++ + +g++sk +++l
VIMSS305301 24 CSVTPRDDVIVSPQTVQVKGE-NGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIALDKIIVQEMGESSKMRSRL 120
9********************.667889999***************************************************987777********** PP
DUF2884 99 kekldevqakvkekfykdgdkfvlgadslskieeafdeefeqeieqlveesigsilaalgekmlegegdsmeeleqrmeklgekieekveeqakelek 196
++ ++++++++ + ++ d ++++ + ++++ + ++ ++q++ + ++si ++ a +++l+++g+ +++ ++ l++ i ++ ++q k +++
VIMSS305301 121 TKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLVNQAMGGILQDSINEMGA---KAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQ 215
9999***********************************************999886...5789999999**************************** PP
DUF2884 197 kAdelCesleelaaleqqL 215
++++C+++ +l+ + ++L
VIMSS305301 216 FGKDVCSRVVTLEDSRKAL 234
**********999888777 PP
Or compare VIMSS305301 to CDD or PaperBLAST