VIMSS56884 has 144 amino acids
Query: DUF2946 [M=118]
Accession: PF11162.12
Description: Protein of unknown function (DUF2946)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.8e-15 42.5 11.5 6.3e-15 42.2 11.5 1.1 1 VIMSS56884
Domain annotation for each sequence (and alignments):
>> VIMSS56884
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 42.2 11.5 6.3e-15 6.3e-15 4 118 .] 24 143 .. 21 143 .. 0.86
Alignments for each domain:
== domain 1 score: 42.2 bits; conditional E-value: 6.3e-15
DUF2946 4 all.avllavlaPlvsq....aaaaaaaasllageiCssags.aaaaaaaagdagddsaasaadsehCgyCsllaagpalppaalapllpaaaaaaapa 96
al+ +vl+++la+ v + + +++ +++++ g +C +++s +++ ++++g+agd+ + +++ ++C++Cs l +al +++ l++ + a +p+
VIMSS56884 24 ALCaCVLVNALACGVLHlqalGVGSDKGQKASVGLFCVAGASqWLSLDPDDGAAGDPAPINPQLPMSCPMCSALVLFVALGVIWSWRLQRRRHARFRPP 122
8888***************999**************************************************998766666666666777777777777 PP
DUF2946 97 lalaaapalpallpaarpRAPP 118
+++ + p++ ++pa + RA+P
VIMSS56884 123 ATREPVPPRYVWPPANP-RASP 143
77666666666666666.***9 PP
Or compare VIMSS56884 to CDD or PaperBLAST