VIMSS60235 has 129 amino acids
Query: DUF2946 [M=118]
Accession: PF11162.12
Description: Protein of unknown function (DUF2946)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-20 58.9 12.0 4.7e-20 58.7 12.0 1.0 1 VIMSS60235
Domain annotation for each sequence (and alignments):
>> VIMSS60235
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 58.7 12.0 4.7e-20 4.7e-20 1 118 [] 9 127 .. 9 127 .. 0.90
Alignments for each domain:
== domain 1 score: 58.7 bits; conditional E-value: 4.7e-20
DUF2946 1 awlallavllavlaPlvsqaaaaaaaasllageiCssags....aaaaaaaagdagddsaasaadsehCgyCsllaagpalppaalapllpaaaaaaap 95
awla lavl+++++ ++sqa++++ asll+g +Cs++++ +aa ++ + +d++ s a + +C C+ +a++p+l+++++a++l+++a+ a++
VIMSS60235 9 AWLASLAVLMNLFVVPLSQALTTQERASLLLGGFCSTSSDsllrLKLGAALKDIDLPDDHESLAPHLCC--CAGAAGTPGLVASWPALPLAPLASPARN 105
8*****************************************985555555666666666666777788..9*************************** PP
DUF2946 96 alalaaapalpallpaarpRAPP 118
a++ p+l+ ++ a + RA+P
VIMSS60235 106 AFSATDLPPLRYWRLANP-RASP 127
****99999999999999.***9 PP
Or compare VIMSS60235 to CDD or PaperBLAST