VIMSS955532 has 168 amino acids
Query: DUF2946 [M=118]
Accession: PF11162.12
Description: Protein of unknown function (DUF2946)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5e-13 36.0 21.0 5e-13 36.0 21.0 1.7 2 VIMSS955532
Domain annotation for each sequence (and alignments):
>> VIMSS955532
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.7 0.1 0.26 0.26 83 99 .. 3 19 .. 1 30 [. 0.68
2 ! 36.0 21.0 5e-13 5e-13 2 118 .] 36 165 .. 35 165 .. 0.80
Alignments for each domain:
== domain 1 score: -1.7 bits; conditional E-value: 0.26
DUF2946 83 apllpaaaaaaapalal 99
+p+++++++ ++++++l
VIMSS955532 3 HPVARWSRPSHPVTWRL 19
56677777777776665 PP
== domain 2 score: 36.0 bits; conditional E-value: 5e-13
DUF2946 2 wlallavllavlaPlvsqaaaaaaaasllageiCssags...............aaaaaaaagdagddsaasaadsehCgyCsllaagpalppaalap 84
la+lav+l ++aPl+s+ +++++++++ +++ sa+s +a+ +aa ++++s++ a ++e+C yC+l+a ++ l +al+
VIMSS955532 36 LLACLAVVLMLVAPLISRWSQTQSTEPMCMSAPAVSAASwlhadhryeppviaaQAHPGAALATQHPGSHDAAIHGEACDYCVLAARVLPLLIVALLC 133
59***99999********7777777777777777777778************9755555556667777888888888**********99999999999 PP
DUF2946 85 llpaaaaaaapalalaaapalpallpaarpRAPP 118
ll+++++ +++ + a+ + ++++ +a R+PP
VIMSS955532 134 LLQLRPTPVPAHIQASARSVFRWAALGA--RGPP 165
9888888888888866666666666666..***9 PP
Or compare VIMSS955532 to CDD or PaperBLAST