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Align VIMSS74698 to PF11245 (DUF2544)

VIMSS74698 has 280 amino acids

Query:       DUF2544  [M=246]
Accession:   PF11245.12
Description: Protein of unknown function (DUF2544)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.7e-80  256.1   4.9    2.1e-80  255.8   4.9    1.1  1  VIMSS74698  


Domain annotation for each sequence (and alignments):
>> VIMSS74698  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  255.8   4.9   2.1e-80   2.1e-80       1     246 []      56     280 .]      56     280 .] 0.94

  Alignments for each domain:
  == domain 1  score: 255.8 bits;  conditional E-value: 2.1e-80
     DUF2544   1 lkiatpeavyvgeykssswllsghrkgeiltavswsgpepapkvklkdydqtvskaacknlpsnwrncgsytlevivsaeiesdyscpwlvsshivatt 99 
                 ++++tp  v +g+y+s        rkg++l+  swsg  pap ++l dy +t + + c+++ +    c ++t++v+v+++   +y+cpw++s + v+ +
  VIMSS74698  56 VTVVTPGEVSYGQYNS-----N-ARKGDTLKLISWSGSGPAPTLVLTDYRRT-DTSNCPGINTRVFVCAYMTFNVTVESD---NYGCPWIASFYSVSEA 144
                 6889999999995544.....3.79************************987.889************************...********65555443 PP

     DUF2544 100 fitneseaspggvtysgpdsrdsvcpkvsvdtydvswdenvvkkkklltldatggvvektlstylmkdgklcdsskldergaycrfvasgitltvlgcd 198
                           g  ty++p  +ds+cp ++v ++d+sw +n+v+++k l l++ g ++  tlstylm+ gklcd+s +d rgaycr v++ +t+t  gcd
  VIMSS74698 145 ---------FGFGTYTSPTVHDSICPTIPVASFDISWSDNYVSHNKALRLQSDGSTITTTLSTYLMESGKLCDGSIFDSRGAYCRAVSDLLTFTSYGCD 234
                 .........46679************************************************************************************* PP

     DUF2544 199 kaevsvsavdhpitdkelhdivvavdtrsiqsgqidstcrfqyildel 246
                 +a+v+v++ + p+td++lhdivv+v+t+s ++  idstcrfqy+l+el
  VIMSS74698 235 NAKVTVTPSRQPLTDRKLHDIVVQVNTSSREP--IDSTCRFQYVLNEL 280
                 ********************************..*************8 PP



Or compare VIMSS74698 to CDD or PaperBLAST