VIMSS147331 has 241 amino acids
Query: DUF3053 [M=219]
Accession: PF11254.12
Description: Protein of unknown function (DUF3053)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-99 316.6 11.3 5.1e-99 316.4 11.3 1.0 1 VIMSS147331
Domain annotation for each sequence (and alignments):
>> VIMSS147331
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 316.4 11.3 5.1e-99 5.1e-99 1 218 [. 19 236 .. 19 237 .. 0.99
Alignments for each domain:
== domain 1 score: 316.4 bits; conditional E-value: 5.1e-99
DUF3053 1 lllllvvllLagCgdkepeqRkAFiafLqntviesgvkvpalteaqkkafGdyvsdYavltafsqqlsqavdtsleplldavsrirvvqdyvtrrdaL 98
ll++lv++l+++Cgdke eqRkAFi++Lqntv++sg+k+p+l+e+qk++fG+yvsdYa+l +fsqqls++vd+sl+p+++++++irv+qdy+++rdaL
VIMSS147331 19 LLAFLVMFLVTACGDKELEQRKAFIDYLQNTVMRSGMKLPTLSEDQKQKFGPYVSDYAILVTFSQQLSKSVDASLVPAIEQINQIRVAQDYLSKRDAL 116
5799********************************************************************************************** PP
DUF3053 99 rqaagalnelaqqlqnakaqadaaraaLkqpddlkavydkaydktVtapanalepvipaaesaledlvqvgdflqkqgdqvefegngiqvktpqqasq 196
+q+agaln+l+qq+++akaqad+a+aaLk+pddlk+v+++a+d++Vt+pan l p++p+++s+++dlvqvgdflq+qg+qv+f+++giq++tpqqa+q
VIMSS147331 117 QQSAGALNLLVQQIRTAKAQADSAQAALKLPDDLKVVFNRAFDNIVTQPANVLIPAVPVVSSFVQDLVQVGDFLQQQGTQVTFNNGGIQFQTPQQAAQ 214
************************************************************************************************** PP
DUF3053 197 yNklltaLneqqqellqaqksl 218
yN+++++L +++ e+++aqk++
VIMSS147331 215 YNTMMSNLVAKYPEMMAAQKRV 236
********************97 PP
Or compare VIMSS147331 to CDD or PaperBLAST