VIMSS148539 has 247 amino acids
Query: DUF3053 [M=219]
Accession: PF11254.12
Description: Protein of unknown function (DUF3053)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-78 248.8 1.7 2.8e-78 248.6 1.7 1.0 1 VIMSS148539
Domain annotation for each sequence (and alignments):
>> VIMSS148539
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 248.6 1.7 2.8e-78 2.8e-78 1 218 [. 12 240 .. 12 241 .. 0.99
Alignments for each domain:
== domain 1 score: 248.6 bits; conditional E-value: 2.8e-78
DUF3053 1 lllllvvllLagCgdkepeqRkAFiafLqntvies.gvkvpalteaqkkafGdyvsdYav.ltafsqqlsqavdtsleplldavsrirvvqdyvtrrd 96
++++lv+++L+gC++k++++R+AF+++L++++i+s +v v++lt+aq++afG+y++dY+v lta++q+++++++t++e++++ v i++++d++++ +
VIMSS148539 12 VIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQIITSpVVGVCELTPAQRQAFGHYADDYDVlLTAYGQIFAVVYETGQEDKITGV--IQSERDNLVFLN 107
6899********************************************************99**********************..************ PP
DUF3053 97 aLrqaagalnelaqqlqnakaqadaaraaLkqpddlkavydkaydktVtapanalepvipaaesaledlvqvgdflqkqgdqvefegngiqv...... 188
+Lr a++++n+++ +l+n++++++++++aLk+p+d+k+v+d+a++ktVt+ +++++++++++ ++l++lv++g+flqkqg++v+fe+ng++v
VIMSS148539 108 ELRVARDVNNRFILRLKNVSSENRKKYSALKLPADVKPVFDAAWNKTVTPLDETMTRYYFLRGKRLDQLVAMGEFLQKQGNKVRFETNGKAVfadlaa 205
************************************************************************************************** PP
DUF3053 189 ktpqqasqyNkllta.....Lneqqqellqaqksl 218
k+++q++q+N+++t+ L++q+ e++++q+++
VIMSS148539 206 KEHFQDQQFNFFITQndinhLTQQMVEFINSQQDA 240
**************99****************987 PP
Or compare VIMSS148539 to CDD or PaperBLAST