VIMSS306117 has 276 amino acids
Query: DUF3053 [M=219]
Accession: PF11254.12
Description: Protein of unknown function (DUF3053)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.9e-102 325.6 5.0 9.3e-102 325.4 5.0 1.0 1 VIMSS306117
Domain annotation for each sequence (and alignments):
>> VIMSS306117
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 325.4 5.0 9.3e-102 9.3e-102 2 218 .. 55 271 .. 54 272 .. 0.99
Alignments for each domain:
== domain 1 score: 325.4 bits; conditional E-value: 9.3e-102
DUF3053 2 llllvvllLagCgdkepeqRkAFiafLqntviesgvkvpalteaqkkafGdyvsdYavltafsqqlsqavdtsleplldavsrirvvqdyvtrrdaLr 99
++ll+v++L+gC+dke +qRkAFi+fLqntv++sg+++p+lt++qkk+fG++vsdYa+l+++sqq++qa+d++l+p++d+v++irv+qdyvt++ Lr
VIMSS306117 55 AALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLR 152
79************************************************************************************************ PP
DUF3053 100 qaagalnelaqqlqnakaqadaaraaLkqpddlkavydkaydktVtapanalepvipaaesaledlvqvgdflqkqgdqvefegngiqvktpqqasqy 197
+++g+l++laqqlqnak qadaa++aLkq+ddlk+v+d+a++k+Vt+pa+al+p+ipaa++++++lv+vgd++++qg+qv+f +ngiq++t+qqas+y
VIMSS306117 153 EMNGSLGVLAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEY 250
************************************************************************************************** PP
DUF3053 198 NklltaLneqqqellqaqksl 218
Nkl+++L++q+q+++qa++++
VIMSS306117 251 NKLIAPLPAQHQAFNQAWTTA 271
******************976 PP
Or compare VIMSS306117 to CDD or PaperBLAST