VIMSS1803203 has 355 amino acids
Query: DUF3048 [M=148]
Accession: PF11258.12
Description: Protein of unknown function (DUF3048) N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4e-52 162.5 0.0 6e-52 161.9 0.0 1.3 1 VIMSS1803203
Domain annotation for each sequence (and alignments):
>> VIMSS1803203
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 161.9 0.0 6e-52 6e-52 2 147 .. 69 209 .. 68 210 .. 0.96
Alignments for each domain:
== domain 1 score: 161.9 bits; conditional E-value: 6e-52
DUF3048 2 TGepavdeelakqrPvaVmieNskaarpqsGlskAdvvyEalvEggiTRlmavfesekepekiGpvRSaRpyyielakefdailvhaGgseealell 98
TG +++++ ++ P+++ ieNs+aarpqsGls+Ad+vyE+++E+gi R++avf++ ++pe iGpvRS+Rpy+++++ke d ++h+Ggs eal+++
VIMSS1803203 69 TGNL-LESDSIDNIPFMCIIENSRAARPQSGLSEADIVYETMAEAGIPRFLAVFYE-NSPEAIGPVRSVRPYFLDISKEHDLPFAHCGGSAEALATI 163
8996.888999********************************************5.99************************************** PP
DUF3048 99 kkkakidnldgleaekaeaafyRdkdrkaphnlytsgeklakaaekkgy 147
+++++++++++++ +++af+Rd++rkaphnlyts ++++k ++++gy
VIMSS1803203 164 SSDKSLNSINEIK---NGSAFWRDNTRKAPHNLYTSAKNIRKFIADNGY 209
***********76...4689**************************998 PP
Or compare VIMSS1803203 to CDD or PaperBLAST