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Align NP_610220.1 to PF11326 (DUF3128)

NP_610220.1 has 156 amino acids

Query:       DUF3128  [M=80]
Accession:   PF11326.12
Description: Protein of unknown function (DUF3128)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-18   52.9   5.6      2e-18   52.9   5.6    1.9  2  NP_610220.1  


Domain annotation for each sequence (and alignments):
>> NP_610220.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.2   0.1     0.072     0.072      65      80 .]      10      26 ..       2      26 .. 0.62
   2 !   52.9   5.6     2e-18     2e-18       2      80 .]      26     108 ..      25     108 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.2 bits;  conditional E-value: 0.072
      DUF3128 65 kkakr.kkssedvWelR 80
                  k ++ k+s +d W +R
  NP_610220.1 10 SKSDKsKESLDDAWAIR 26
                 33333468889999887 PP

  == domain 2  score: 52.9 bits;  conditional E-value: 2e-18
      DUF3128   2 mscreafdellsCyslggqfknyYryGelksCsekwedfkfClrlk..ekkeeeaqealrereeekkakr..kkssedvWelR 80 
                  ++c+ + +e+ +C+s++ +f++y+++G+ ++Cs++ +d+++C r++  + ++ +a +a++++eee++  r  ++  +d W++R
  NP_610220.1  26 RPCHLYKEEYDDCTSFKARFHQYFIFGKDTDCSQWLTDYRNCERYQqsNGNDVAAGKAVIKSEEERRRIRlrAHFANDTWQKR 108
                  68********************************************7777788889999999999999889999*******98 PP



Or compare NP_610220.1 to CDD or PaperBLAST