VIMSS103933 has 331 amino acids
Query: DUF4352 [M=125]
Accession: PF11611.12
Description: Domain of unknown function (DUF4352)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-35 107.7 4.6 2.5e-35 107.7 4.6 2.4 2 VIMSS103933
Domain annotation for each sequence (and alignments):
>> VIMSS103933
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 107.7 4.6 2.5e-35 2.5e-35 1 124 [. 81 213 .. 81 214 .. 0.95
2 ? -1.9 4.0 0.2 0.2 22 82 .. 217 279 .. 208 295 .. 0.46
Alignments for each domain:
== domain 1 score: 107.7 bits; conditional E-value: 2.5e-35
DUF4352 1 skvgetvkvgdlevtvnsveytlsvgeneylqpdagneflivdvtvkNkgkealtvnssqfkLkdgdgkeydadlsasskadd.........lflgtl 89
+k+getvk gdlevtvnsve+++svg + +a++ f+++dvt+kNkgkealt++ss+fkLk gd k+++ad ++s++a++ +fl+++
VIMSS103933 81 HKIGETVKNGDLEVTVNSVETMKSVG-PSLAPTNAKGIFVVADVTIKNKGKEALTIDSSMFKLKSGD-KTFEADNTGSMSANQsdngsiensFFLQRI 176
68************************.99999**********************************9.*************9999************* PP
DUF4352 90 npgkevsGklvFevpkgkkk...yeLeystsisfsgka 124
np+++ +Gk+vF+v+++ + +Le+ +s+ fs k+
VIMSS103933 177 NPDSTAQGKIVFDVSENIANakdKKLEVISSL-FSVKK 213
***************9877666699***8888.99876 PP
== domain 2 score: -1.9 bits; conditional E-value: 0.2
DUF4352 22 tlsvgeneylqpdagneflivdvtvkNkgkealtvnss...qfkLkdgdgkeydadlsasskad 82
+ls+ +++ +++++++ v v+ N ++ + +++ ++ d+d++ ++ ++++++k++
VIMSS103933 217 DLSDA-KKTSKAKKDKQDTEVAVASSNSDNVNYEASATtpaTTSSADTDSEDSEKSSKDEDKQN 279
33333.4444444444444444444444444444333320044444444444444444444443 PP
Or compare VIMSS103933 to CDD or PaperBLAST