VIMSS1165188 has 331 amino acids
Query: DUF4352 [M=125]
Accession: PF11611.12
Description: Domain of unknown function (DUF4352)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.1e-35 106.2 5.1 7.1e-35 106.2 5.1 2.5 2 VIMSS1165188
Domain annotation for each sequence (and alignments):
>> VIMSS1165188
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 106.2 5.1 7.1e-35 7.1e-35 1 124 [. 81 213 .. 81 214 .. 0.95
2 ? -2.2 4.4 0.25 0.25 24 81 .. 219 278 .. 209 294 .. 0.42
Alignments for each domain:
== domain 1 score: 106.2 bits; conditional E-value: 7.1e-35
DUF4352 1 skvgetvkvgdlevtvnsveytlsvgeneylqpdagneflivdvtvkNkgkealtvnssqfkLkdgdgkeydadlsasskadd.........lflgt 88
+k+getvk +dlevtvnsve+++svg + +a++ f+++dvt+kNkgkealt++ss+fkLk gd k+++ad ++s++a++ +fl++
VIMSS1165188 81 HKIGETVKNDDLEVTVNSVETMKSVG-PSLAPTNAKGIFVVADVTIKNKGKEALTIDSSMFKLKSGD-KTFEADNTGSMSANQsdngsiensFFLQR 175
68************************.99999**********************************9.*************9999************ PP
DUF4352 89 lnpgkevsGklvFevpkgkkk...yeLeystsisfsgka 124
+np+++ +Gk+vF+v+++ + +Le+ +s+ fs k+
VIMSS1165188 176 INPDSTAQGKIVFDVSENIANakdKKLEVISSL-FSVKK 213
****************9877666699***8888.99876 PP
== domain 2 score: -2.2 bits; conditional E-value: 0.25
DUF4352 24 svgeneylqpdagneflivdvtvkNkgkealtvnss...qfkLkdgdgkeydadlsasska 81
s+ +++ +++++++ v v+ N ++ + +++ ++ d+d++ ++ ++++++k+
VIMSS1165188 219 SDA-KKTSKAKKDKQDTEVAVASSNSDNVNYEASATtpaTTSSADTDSEDSEKSSKDEDKQ 278
333.344444444444444444444444433333332003333344444444444433333 PP
Or compare VIMSS1165188 to CDD or PaperBLAST