VIMSS261952 has 331 amino acids
Query: DUF4352 [M=125]
Accession: PF11611.11
Description: Domain of unknown function (DUF4352)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-40 123.1 6.2 4.4e-40 123.1 6.2 2.4 2 VIMSS261952
Domain annotation for each sequence (and alignments):
>> VIMSS261952
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 123.1 6.2 4.4e-40 4.4e-40 1 125 [] 81 214 .. 81 214 .. 0.97
2 ? 0.4 0.2 0.041 0.041 58 103 .. 213 250 .. 207 265 .. 0.55
Alignments for each domain:
== domain 1 score: 123.1 bits; conditional E-value: 4.4e-40
BSTCEEECCTTEEEEEEEEEEEEEETTS-CEETT--SEEEEEEEEEEE-SSS-EEEEGGGEEEEETTEEE-BEEESCCCCTTB.........--EEEE CS
DUF4352 1 skigetvkvgdlevtvnsveytksvgknellqqdagneflivdvtveNkgkealtvnssqfkLkdgdgksydadfsasskadd.........lflgtl 89
+kigetvk+gdlevtvnsve++ksvg ++ ++a+++f+++dvt++Nkgkealt++ss+fkLk+gd k+++ad+++s++a++ +fl+++
VIMSS261952 81 HKIGETVKNGDLEVTVNSVETMKSVG-PSIAPTNAKGTFVVADVTIKNKGKEALTIDSSMFKLKSGD-KTFEADNTGSMSANQndngsiensFFLQRI 176
79************************.**************************************99.*************99*************** PP
-TT-EEEEEEEEEESTT-CG...EEEEE-HBB-TTTCHH CS
DUF4352 90 npgkkvsGklvFevpkgkkk...ykLeystslsfsgkki 125
np+++ +Gk+vF+v+++ + +kLe+ +sl fs kki
VIMSS261952 177 NPDSTAQGKIVFDVSENIANakdKKLEVISSL-FSVKKI 214
****************9999889*****9999.999876 PP
== domain 2 score: 0.4 bits; conditional E-value: 0.041
GGGEEEEETTEEE-BEEESCCCCTTB.--EEEE-TT-EEEEEEEEEE CS
DUF4352 58 ssqfkLkdgdgksydadfsasskadd.lflgtlnpgkkvsGklvFev 103
++ f+L d + +ska++ ++++++++ ++ s ++++e+
VIMSS261952 213 KITFDLSDAK---------KTSKAKKdKQDTEVAAASSNSDNVSYEA 250
4444444443.........1222221255566666666666666655 PP
Or compare VIMSS261952 to CDD or PaperBLAST