VIMSS261952 has 331 amino acids
Query: DUF4352 [M=125]
Accession: PF11611.12
Description: Domain of unknown function (DUF4352)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.3e-35 107.3 5.8 3.3e-35 107.3 5.8 2.5 3 VIMSS261952
Domain annotation for each sequence (and alignments):
>> VIMSS261952
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 107.3 5.8 3.3e-35 3.3e-35 1 124 [. 81 213 .. 81 214 .. 0.95
2 ! 4.5 1.1 0.0021 0.0021 46 105 .. 194 252 .. 193 267 .. 0.87
3 ? -0.8 2.1 0.097 0.097 29 103 .. 226 250 .. 209 301 .. 0.53
Alignments for each domain:
== domain 1 score: 107.3 bits; conditional E-value: 3.3e-35
DUF4352 1 skvgetvkvgdlevtvnsveytlsvgeneylqpdagneflivdvtvkNkgkealtvnssqfkLkdgdgkeydadlsasskadd.........lflgtl 89
+k+getvk gdlevtvnsve+++svg + +a+++f+++dvt+kNkgkealt++ss+fkLk gd k+++ad ++s++a++ +fl+++
VIMSS261952 81 HKIGETVKNGDLEVTVNSVETMKSVG-PSIAPTNAKGTFVVADVTIKNKGKEALTIDSSMFKLKSGD-KTFEADNTGSMSANQndngsiensFFLQRI 176
68************************.***************************************9.***********999999************* PP
DUF4352 90 npgkevsGklvFevpkgkkk...yeLeystsisfsgka 124
np+++ +Gk+vF+v+++ + +Le+ +s+ fs k+
VIMSS261952 177 NPDSTAQGKIVFDVSENIANakdKKLEVISSL-FSVKK 213
***************9877666699***8888.99876 PP
== domain 2 score: 4.5 bits; conditional E-value: 0.0021
DUF4352 46 vkNkgkealtvnssqfkLkdgdgkeydadlsasskaddlflgtlnpgkevsGklvFevpk 105
+ N +++l v ss f++k+ +da+ + + k+d ++++++++ ++ s ++++e++
VIMSS261952 194 IANAKDKKLEVISSLFSVKKITFDLSDAKKTSKAKKD-KQDTEVAAASSNSDNVSYEASA 252
7899999***********9888888888888777776.8**********99999999875 PP
== domain 3 score: -0.8 bits; conditional E-value: 0.097
DUF4352 29 eylqpdagneflivdvtvkNkgkealtvnssqfkLkdgdgkeydadlsasskaddlflgtlnpgkevsGklvFev 103
+ ++ ++++++++ ++ s ++++e+
VIMSS261952 226 KAKKD--------------------------------------------------KQDTEVAAASSNSDNVSYEA 250
22222..................................................33333444433333333333 PP
Or compare VIMSS261952 to CDD or PaperBLAST