VIMSS5568461 has 353 amino acids
Query: DUF4352 [M=125]
Accession: PF11611.11
Description: Domain of unknown function (DUF4352)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-18 54.0 2.6 1e-18 54.0 2.6 2.5 2 VIMSS5568461
Domain annotation for each sequence (and alignments):
>> VIMSS5568461
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 54.0 2.6 1e-18 1e-18 2 122 .. 44 158 .. 43 162 .. 0.86
2 ? -1.0 2.2 0.11 0.11 14 73 .. 202 255 .. 174 283 .. 0.52
Alignments for each domain:
== domain 1 score: 54.0 bits; conditional E-value: 1e-18
STCEEECCTTEEEEEEEEEEEEEETTS-CEETT--SEEEEEEEEEEE-SSS-EEEEGGGEEEEETTEEE-BEEESCCCCTTB--EEEE-TT-EEEEE CS
DUF4352 2 kigetvkvgdlevtvnsveytksvgknellqqdagneflivdvtveNkgkealtvnssqfkLkdgdgksydadfsasskaddlflgtlnpgkkvsGk 98
+g+tv+++ + ++v ++ey + ++e+ ++++ +++l+v ++++N+ k+++ v+ss f+ k g++y ++ + d f+ +ln+g++ +G+
VIMSS5568461 44 RVGQTVTADGVDIKVMKAEYVND--YDEYSAPEN-GKVLKVYLKFKNNNKDQVLVDSSAFSMK-VRGENYPEWYGG-DGTDGMFSHQLNQGNTATGT 135
69****************76655..46***9988.89**************************.555777655554.444449************** PP
EEEEESTT-CGEEEEE-HBB-TTT CS
DUF4352 99 lvFevpkgkkkykLeystslsfsg 122
l ++vp+ y+Le++t+++ ++
VIMSS5568461 136 LIYDVPESNF-YTLEMDTNFNLKN 158
*******999.*****99887665 PP
== domain 2 score: -1.0 bits; conditional E-value: 0.11
EEEEEEEEEEEETTS-CEETT--SEEEEEEEEEEE-SSS-EEEEGGGEEEEETTEEE-BE CS
DUF4352 14 vtvnsveytksvgknellqqdagneflivdvtveNkgkealtvnssqfkLkdgdgksyda 73
+t +++ + +e+++ ++g++ v+ v+Nk++ +l kL+++ g +y+
VIMSS5568461 202 YTADEY---NALV-DEYNALTDGEKMNHVTRGVTNKEYNDLAA--RVEKLYEELGAEYEK 255
333333...2222.34444477777777777777777665532..233333333333333 PP
Or compare VIMSS5568461 to CDD or PaperBLAST