VIMSS2093101 has 277 amino acids
Query: DUF3281 [M=267]
Accession: PF11685.12
Description: Protein of unknown function (DUF3281)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.3e-88 280.1 7.0 1.1e-87 279.9 7.0 1.0 1 VIMSS2093101
Domain annotation for each sequence (and alignments):
>> VIMSS2093101
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 279.9 7.0 1.1e-87 1.1e-87 1 267 [] 5 274 .. 5 274 .. 0.93
Alignments for each domain:
== domain 1 score: 279.9 bits; conditional E-value: 1.1e-87
DUF3281 1 kkklligtailssaailgscgksetatelrivdqcntandlckfeltdalvsrytnllgktieriesqtplq..aiqgtitwntpagatlatntdvv 95
kkk++ig+ai+s + +l scgk+ ta elriv qc nd+c feltda+vsrytn+lgktier+es+tpl+ i+g i w+ pa a la n++v
VIMSS2093101 5 KKKVVIGAAIISGTVLLASCGKTTTAKELRIVHQCTDNNDMCEFELTDAVVSRYTNMLGKTIERVESKTPLRdgDIKGVIRWDVPASAELADNSEVQ 101
89*********************************************************************8446********************** PP
DUF3281 96 tqlgsgcqndsctananptafnlqvgsnsisvsgtitvngktvnlastvppvtvdtiqvadshvfqsgtlpagltigdlvtnlninardahgtfseq 192
+ lg cq+d ct n+np+a+nl g+n isvsg +tv+ k +nla tv p vdt ++ +s++fq+gtlp+glt+ +l+++ln +++ ahgtfs+
VIMSS2093101 102 SALGVSCQDDKCTENSNPSAYNLPSGTNIISVSGLVTVDDKEINLA-TVKPDIVDTGEIENSYIFQTGTLPSGLTLDNLIAELNKDSKKAHGTFSKS 197
*********************************************8.788899******************************************** PP
DUF3281 193 ngtlkitcetgyewiddqdppfgsfttastsrsvamsswlr.etnswingaqpnfsltqngvsntvsyt.wiagcwq 267
l itc+ gyew+d + p+g ++ va + w e + + + a+ + + v t t w agcwq
VIMSS2093101 198 GSNLMITCDDGYEWLDGVNVPYGQQINTTHNTGVAGTKWNTtEGKFYDEQADTPWVMNGYLVDATKGETqWQAGCWQ 274
*************************999999********7514444445555555555555888876555******9 PP
Or compare VIMSS2093101 to CDD or PaperBLAST