VIMSS1233885 has 585 amino acids
Query: DUF3300 [M=227]
Accession: PF11737.12
Description: Protein of unknown function (DUF3300)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-83 265.3 10.5 1.5e-82 262.6 10.5 2.4 1 VIMSS1233885
Domain annotation for each sequence (and alignments):
>> VIMSS1233885
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 262.6 10.5 1.5e-82 1.5e-82 1 227 [] 74 333 .. 74 363 .. 0.87
Alignments for each domain:
== domain 1 score: 262.6 bits; conditional E-value: 1.5e-82
DUF3300 1 sqaeldqllapiALYPDsllsqvLmastyPlevveAerwskknkklkgdalvkavekkdWDpSvkaLvafpdvLekmsedldwtqklGdaflaqeee 97
s+a++dq++ap+ALYPDsllsqvLmastyP++v +A +ws++n+ +gda+ +av++++WD+Svk+Lvafp++++ m e+++w+q+lGdaflaq+++
VIMSS1233885 74 STAQIDQWVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQD 170
579********************************************************************************************** PP
DUF3300 98 vldsvqrLRqkAkeagnLksneqqkvvve................................keeiviepadpevvYvPyYdptvvYgawaypayppv 162
v+dsvqrLRq A+++g+Lks+++qk++ + ++i+iepa+p+vvY+P Y+p+vvYg+wa++ayppv
VIMSS1233885 171 VMDSVQRLRQLAQQTGSLKSSTEQKIIATtkkvvpvnqpanapatqsntvstsspvvaepaPTVITIEPANPDVVYIPNYNPNVVYGSWANTAYPPV 267
**************************99999*****************************999********************************** PP
DUF3300 163 ywapppayasavgiafaagvaigl.....salfsefdWekrd.................vdvdvnranninknnsrskrkeekrwqh 227
y++pp++ + + +f+ g+ +++ alfs++dW+++d ++ + wqh
VIMSS1233885 268 YLPPPAG--EPFVDSFVRGFGYSMgvattYALFSSIDWDDDDhdhhhhddddyhhhdggH-------------------RDGNDWQH 333
***9999..5555566666666655566679********999344444444444444440...................55566665 PP
Or compare VIMSS1233885 to CDD or PaperBLAST