VIMSS898360 has 539 amino acids
Query: DUF3300 [M=227]
Accession: PF11737.12
Description: Protein of unknown function (DUF3300)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.1e-88 281.2 4.1 6.5e-88 280.1 4.1 1.5 1 VIMSS898360
Domain annotation for each sequence (and alignments):
>> VIMSS898360
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 280.1 4.1 6.5e-88 6.5e-88 2 227 .] 61 334 .. 60 339 .. 0.95
Alignments for each domain:
== domain 1 score: 280.1 bits; conditional E-value: 6.5e-88
DUF3300 2 qaeldqllapiALYPDsllsqvLmastyPlevveAerwskknkklkgdalvkavekkdWDpSvkaLvafpdvLekmsedldwtqklGdaflaqeeevl 99
+a++dq++ap+ALYPD+llsqvLmastyP++vv+A +ws++n++l+gda+ +av++++WDpSvk+Lvafp++++ m e+++w+q+lGdaflaq+++v+
VIMSS898360 61 TAQIDQWVAPVALYPDALLSQVLMASTYPANVVQAVQWSRDNPTLQGDAAIQAVASQPWDPSVKSLVAFPKLMALMGENPQWVQNLGDAFLAQPQDVM 158
68************************************************************************************************ PP
DUF3300 100 dsvqrLRqkAkeagnLksneqqkvvve.......................keeiviepadpevvYvPyYdptvvYgawaypayppvywapppayasav 174
d+vqrLR A+++g+Lks+ qq+v++ +++i+iepa+p+vvYvP Y+p++vYgaw+++ayppvy++ppp+ +++
VIMSS898360 159 DAVQRLRLLAQQTGSLKSTPQQTVTSVpkssastavttttttsastpatpSTVIKIEPANPQVVYVPNYNPATVYGAWPNTAYPPVYLPPPPG--QQF 254
**************************99*********************999*****************************************..999 PP
DUF3300 175 giafaagvaigl.....salfsefdWekrd.........................vdvdvnranninknnsrskrkeekrwqh 227
+ +f++g+ ++l alfs++dW+++d ++++vn+ n+i+ +n ++ wqh
VIMSS898360 255 ADSFVKGFGYSLgvattYALFSSIDWDDDDhhhhdddhhddyhhggngyqhngdnININVNNFNRISGQNLPG---QTMGWQH 334
9999999999888898899*******998888999*****************999999999999998887775...5666666 PP
Or compare VIMSS898360 to CDD or PaperBLAST