PaperBLAST – Find papers about a protein or its homologs

 

Align P9WIN9 to PF11738 (DUF3298)

P9WIN9 has 228 amino acids

Query:       DUF3298  [M=83]
Accession:   PF11738.12
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.7e-19   55.2   0.0      1e-18   54.4   0.0    1.4  1  P9WIN9    


Domain annotation for each sequence (and alignments):
>> P9WIN9  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.4   0.0     1e-18     1e-18       3      83 .]     147     221 ..     145     221 .. 0.90

  Alignments for each domain:
  == domain 1  score: 54.4 bits;  conditional E-value: 1e-18
  DUF3298   3 lFkpgsdylealselikkqlkkqaeeqeleeyeeleeefdaddisaydnFyltddglvfyfnpYeiaPyaaGaieftiPys 83 
              l++ ++d l++++++++ +l+kq+     ++ ++  +  ++ d+ +y+nF++t+dg++f+fnp+e+ P aaG++++ +P+s
   P9WIN9 147 LWQADTDPLPVVFPIVQGELSKQTG----QQVSIAPN--AGLDPVNYQNFAVTNDGVIFFFNPGELLPEAAGPTQVLVPRS 221
              7788999*****************5....55566666..799*************************************86 PP



Or compare P9WIN9 to CDD or PaperBLAST