VIMSS1745731 has 273 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8e-21 61.2 0.0 1.3e-20 60.5 0.0 1.4 1 VIMSS1745731
Domain annotation for each sequence (and alignments):
>> VIMSS1745731
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 60.5 0.0 1.3e-20 1.3e-20 2 84 .] 159 260 .. 158 260 .. 0.97
Alignments for each domain:
== domain 1 score: 60.5 bits; conditional E-value: 1.3e-20
HCBSSC...T.HHHHHH.HHHHHHHHHHTCH.TTS.HCCCCTTT.TTTSS.TTTSSEEEETTEEEEEE-TTSSS........-GGG......-SEEE CS
DUF3298 2 dLFkpg...saylqrls.klikeqikkerekqeedelaglpeps.rddrlilgyqnfyltddglviyfppYeia........Pyaa......Gipef 79
dL+kpg +++++l+ ++i ++++++++++++++++++ +++ +d++++++y++++lt+d+l+iy+p+Y++a P+++ G++++
VIMSS1745731 159 DLMKPGvdpLTAIPPLAqPFIVQALDQAPPPHQPGTYPFVFDRWlPDKVYSGAYKAWALTPDELIIYMPDYPVArdrptdftPGVMqwsmdgGTVQA 255
999999999899999*99******************************************************************************* PP
EEEHC CS
DUF3298 80 eipys 84
+ip++
VIMSS1745731 256 HIPLA 260
***85 PP
Or compare VIMSS1745731 to CDD or PaperBLAST