VIMSS1803002 has 236 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.1e-23 67.8 2.6 7.1e-23 67.8 2.6 2.4 2 VIMSS1803002
Domain annotation for each sequence (and alignments):
>> VIMSS1803002
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 0.4 0.8 0.073 0.073 13 13 .. 58 58 .. 23 126 .. 0.58
2 ! 67.8 2.6 7.1e-23 7.1e-23 1 83 [. 149 223 .. 149 224 .. 0.90
Alignments for each domain:
== domain 1 score: 0.4 bits; conditional E-value: 0.073
H CS
DUF3298 13 r 13
+
VIMSS1803002 58 E 58
2 PP
== domain 2 score: 67.8 bits; conditional E-value: 7.1e-23
HHCBSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEH CS
DUF3298 1 sdLFkpgsaylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipy 83
+dLFk+g +y+ ++k++ke+i+ke+e +++ ++ +++q++yl+ dg+++yf++YeiaPy+ Gi ef+ipy
VIMSS1803002 149 KDLFKEGFDYKCIIDKKVKEDIEKEKELY--------FDNGALFKGVNENQAYYLNRDGIIVYFQQYEIAPYSSGIREFKIPY 223
7***********************99522........23335678899**********************************9 PP
Or compare VIMSS1803002 to CDD or PaperBLAST