VIMSS2124807 has 335 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-12 34.9 0.1 1.3e-12 34.9 0.1 2.8 2 VIMSS2124807
Domain annotation for each sequence (and alignments):
>> VIMSS2124807
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.1 1.0 0.11 0.11 55 55 .. 107 107 .. 22 206 .. 0.60
2 ! 34.9 0.1 1.3e-12 1.3e-12 14 83 .. 239 304 .. 227 305 .. 0.73
Alignments for each domain:
== domain 1 score: -0.1 bits; conditional E-value: 0.11
E CS
DUF3298 55 l 55
+
VIMSS2124807 107 F 107
0 PP
== domain 2 score: 34.9 bits; conditional E-value: 1.3e-12
HHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEH CS
DUF3298 14 lsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipy 83
ls++++ +++ +++ +++ + +++++ ++f +tddg+ +++ppY ++P a+G+++ ++p+
VIMSS2124807 239 LSAMLWGYYEQRTPPDVNGKRETF----TPKQDFYVSEDFLFTDDGVKFIYPPYALGPFAEGEISLTVPW 304
555555555555544443333333....34799************************************9 PP
Or compare VIMSS2124807 to CDD or PaperBLAST