VIMSS220559 has 248 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-13 36.1 0.0 6.4e-12 32.7 0.0 2.3 2 VIMSS220559
Domain annotation for each sequence (and alignments):
>> VIMSS220559
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 1.0 0.0 0.047 0.047 10 39 .. 62 91 .. 56 133 .. 0.74
2 ! 32.7 0.0 6.4e-12 6.4e-12 30 83 .. 163 232 .. 137 233 .. 0.83
Alignments for each domain:
== domain 1 score: 1.0 bits; conditional E-value: 0.047
HHHHHHHHHHHHHHHHTCH.TTS.HCCCCT CS
DUF3298 10 ylqrlsklikeqikkerekqeedelaglpe 39
+l++l+ ++++++ + e+++ ++ + + +
VIMSS220559 62 ALPKLDGIVEKRLLQLTEDNQHGTAPATLQ 91
678899999999988888777666655443 PP
== domain 2 score: 32.7 bits; conditional E-value: 6.4e-12
TTS.HCCCCTTT................TTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEH CS
DUF3298 30 eedelaglpeps................rddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipy 83
+ed+ ++++e+s +++ +++ + +lt + +v+ + Y iaPy++G +e +ipy
VIMSS220559 163 QEDTFWKTVEEShrawlmsvgmdkdaefVKTWPFKKSPHVALTYGAVVVKYEVYAIAPYSMGHVELKIPY 232
5566666666667777777777777777789999***********************************9 PP
Or compare VIMSS220559 to CDD or PaperBLAST