VIMSS2227855 has 261 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-17 50.7 0.0 2.8e-17 49.8 0.0 1.4 1 VIMSS2227855
Domain annotation for each sequence (and alignments):
>> VIMSS2227855
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 49.8 0.0 2.8e-17 2.8e-17 2 82 .. 148 246 .. 147 247 .. 0.84
Alignments for each domain:
== domain 1 score: 49.8 bits; conditional E-value: 2.8e-17
HCBSSC...T.HHHHHH.HHHHHHHHHHTCH.TTS.HCCCCTTT.TTTSS.TTTSSEEEETTEEEEEE-TTSSS...-GGG..........-SEEEE CS
DUF3298 2 dLFkpg...saylqrls.klikeqikkerekqeedelaglpeps.rddrlilgyqnfyltddglviyfppYeia...Pyaa..........Gipefe 80
d+ kpg a++++l+ ++i+e+++++++++++++++++++++ +d++ ++gy++++lt+d+l++y p+Y+++ P + G+ + +
VIMSS2227855 148 DITKPGvdpLAAIPPLAePFIQEALDRAAWQHSPGTYPFTVDRWtPDKVFSGGYKAWALTPDELILYLPDYPVGhdsPIQYgqseqwsmdgGTAQPH 244
99999999999**************************************************************955533333333444455555555 PP
EE CS
DUF3298 81 ip 82
ip
VIMSS2227855 245 IP 246
55 PP
Or compare VIMSS2227855 to CDD or PaperBLAST