VIMSS3344143 has 272 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-19 57.5 0.0 2.7e-19 56.3 0.0 1.6 2 VIMSS3344143
Domain annotation for each sequence (and alignments):
>> VIMSS3344143
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.9 0.0 0.8 0.8 26 26 .. 106 106 .. 83 138 .. 0.54
2 ! 56.3 0.0 2.7e-19 2.7e-19 2 83 .. 160 259 .. 159 260 .. 0.96
Alignments for each domain:
== domain 1 score: -2.9 bits; conditional E-value: 0.8
T CS
DUF3298 26 r 26
VIMSS3344143 106 I 106
2 PP
== domain 2 score: 56.3 bits; conditional E-value: 2.7e-19
HCBSSC..T.HHHHHH.HHHHHHHHHHTCH.TTS.HCCCCTTT.TTTSS.TTTSSEEEETTEEEEEE-TTSSS........-GGG......-SEEEE CS
DUF3298 2 dLFkpg..saylqrls.klikeqikkerekqeedelaglpeps.rddrlilgyqnfyltddglviyfppYeia........Pyaa......Gipefe 80
d++kpg +++++l+ +++ e ++++++ +++++++++pe++ +d+++++gy++++lt+d+lviy+p+Y++a P+a G++e++
VIMSS3344143 160 DILKPGlgLDAITPLAePYLLEGFDRAAWAHSPGTYPFVPERWtPDKVYSGGYKAWALTPDELVIYMPDYPVAhdypidytPGAQvwsmdgGTVEAH 256
8999999999***************************************************************9999999988889999******** PP
EEH CS
DUF3298 81 ipy 83
ip+
VIMSS3344143 257 IPI 259
*95 PP
Or compare VIMSS3344143 to CDD or PaperBLAST