VIMSS3372921 has 287 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.4e-25 73.8 3.5 9.4e-25 73.8 3.5 2.3 2 VIMSS3372921
Domain annotation for each sequence (and alignments):
>> VIMSS3372921
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 0.7 1.2 0.061 0.061 16 72 .. 119 170 .. 65 176 .. 0.58
2 ! 73.8 3.5 9.4e-25 9.4e-25 2 83 .. 194 269 .. 193 270 .. 0.90
Alignments for each domain:
== domain 1 score: 0.7 bits; conditional E-value: 0.061
HHHHHHHHHHT...CH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-G CS
DUF3298 16 klikeqikker...ekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPy 72
++ ++ k+++ +++++++ ++ ++++++ ++n td l i Y++ +
VIMSS3372921 119 EFYNKSYKEAKqylKDNPDEKNKF-----VANVDFELKKN---TDSALSIKVRYYTYSGG 170
222322222221112222222222.....34455555555...55555555555555555 PP
== domain 2 score: 73.8 bits; conditional E-value: 9.4e-25
HCBSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEH CS
DUF3298 2 dLFkpgsaylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipy 83
dLFk++++y+++++++ik+qi + +k+e e g+ ++++ i+++qnfyl d+ lv+yf++Y+i PyaaGipef+i++
VIMSS3372921 194 DLFKDNTKYKEVIDEEIKRQIAELEKKDE--ENIGI----YNFKGIKENQNFYLQDENLVVYFDLYDITPYAAGIPEFSINK 269
9********************99998777..33333....6799************************************86 PP
Or compare VIMSS3372921 to CDD or PaperBLAST