VIMSS3373987 has 289 amino acids
Query: DUF3298 [M=83]
Accession: PF11738.12
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-28 85.8 4.0 1.6e-28 85.8 4.0 2.2 2 VIMSS3373987
Domain annotation for each sequence (and alignments):
>> VIMSS3373987
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.0 0.3 0.2 0.2 20 21 .. 131 132 .. 91 176 .. 0.57
2 ! 85.8 4.0 1.6e-28 1.6e-28 3 83 .] 200 284 .. 199 284 .. 0.97
Alignments for each domain:
== domain 1 score: -1.0 bits; conditional E-value: 0.2
DUF3298 20 kq 21
q
VIMSS3373987 131 HQ 132
22 PP
== domain 2 score: 85.8 bits; conditional E-value: 1.6e-28
DUF3298 3 lFkpgsdylealselikkqlkkqaeeqeleeyeeleee....fdaddisaydnFyltddgl.vfyfnpYeiaPyaaGaieftiPys 83
lFk++ +y++++s++ik+q+++q++++++++y++++++ d+++i++y++Fy+++++ v++f++Ye+aP+++Ga+ef+iPy+
VIMSS3373987 200 LFKDD-KYIKVISDNIKEQMREQMKKDSTKSYFIDQKKdlpvEDFKTINKYQDFYFNKNEDlVICFDEYEVAPGYMGAVEFVIPYK 284
8***9.7*************************************************999988**********************96 PP
Or compare VIMSS3373987 to CDD or PaperBLAST