VIMSS3373988 has 251 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-23 69.5 2.5 2.1e-23 69.5 2.5 2.4 2 VIMSS3373988
Domain annotation for each sequence (and alignments):
>> VIMSS3373988
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.3 1.2 0.13 0.13 13 27 .. 92 106 .. 37 151 .. 0.65
2 ! 69.5 2.5 2.1e-23 2.1e-23 4 82 .. 162 243 .. 160 245 .. 0.94
Alignments for each domain:
== domain 1 score: -0.3 bits; conditional E-value: 0.13
HHHHHHHHHHHHHTC CS
DUF3298 13 rlsklikeqikkere 27
++ + ++++kke++
VIMSS3373988 92 KIYSEFQNKMKKEDN 106
333344444444443 PP
== domain 2 score: 69.5 bits; conditional E-value: 2.1e-23
BSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTT...TTTSS.TTTSSEEEETTEE.EEEE-TTSSS-GGG-SEEEEEE CS
DUF3298 4 Fkpgsaylqrlsklikeqikkerekqeedelaglpeps...rddrlilgyqnfyltddgl.viyfppYeiaPyaaGipefeip 82
F ++s y+ ++s++ikeq++++ +k++++++++++++ d++ i++yq+fy++++g vi f++Ye+aP+++G++ef+ip
VIMSS3373988 162 F-KDSRYIRAISDNIKEQMRNQIKKDDTKSYFIDQDKDspvKDFESINKYQDFYFNKNGNlVISFDEYEVAPGYMGAVEFVIP 243
5.4568*************************9999999*****************999999*********************9 PP
Or compare VIMSS3373988 to CDD or PaperBLAST