VIMSS3376099 has 247 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-20 60.0 1.9 1.9e-20 60.0 1.9 1.9 2 VIMSS3376099
Domain annotation for each sequence (and alignments):
>> VIMSS3376099
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.1 0.1 0.22 0.22 41 53 .. 77 92 .. 42 109 .. 0.45
2 ! 60.0 1.9 1.9e-20 1.9e-20 1 84 [] 144 217 .. 144 217 .. 0.92
Alignments for each domain:
== domain 1 score: -1.1 bits; conditional E-value: 0.22
T...TTTSS.TTTSSE CS
DUF3298 41 s...rddrlilgyqnf 53
+ +++l++q++
VIMSS3376099 77 EynnAASQNSLPKQSY 92
1112222333333333 PP
== domain 2 score: 60.0 bits; conditional E-value: 1.9e-20
HHCBSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEHC CS
DUF3298 1 sdLFkpgsaylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipys 84
+d+F++g +y++ + ++ik qi+++r e ++ ++ i ++q+fyltd+g++iyf +eiaP + Gip+fe+ +s
VIMSS3376099 144 NDIFRDGVDYINIITDYIKSQINENR----EMYYSNVE------LVIPEDQAFYLTDNGIIIYFGVDEIAPESFGIPKFELKFS 217
59************************....67777776......478899******************************9875 PP
Or compare VIMSS3376099 to CDD or PaperBLAST