VIMSS34809 has 227 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.5e-15 41.7 0.0 1.9e-14 40.8 0.0 1.5 1 VIMSS34809
Domain annotation for each sequence (and alignments):
>> VIMSS34809
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 40.8 0.0 1.9e-14 1.9e-14 2 84 .] 145 220 .. 144 220 .. 0.92
Alignments for each domain:
== domain 1 score: 40.8 bits; conditional E-value: 1.9e-14
HCBSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEHC CS
DUF3298 2 dLFkpgsaylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipys 84
LF pg++ l+ + +++++++ ++ a+lp + ++ +yqnf++tdd+l++yf++ e+ P G+ ++ +p s
VIMSS34809 145 TLFVPGTTPLDSIYPIVQRELARQT----GFGAAILPS---TGLDPAHYQNFAITDDSLIFYFAQGELLPSFVGACQAQVPRS 220
59*********************99....566677776...699*************************************75 PP
Or compare VIMSS34809 to CDD or PaperBLAST