VIMSS3627886 has 275 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.3e-15 43.2 0.6 1.1e-14 41.6 0.0 2.0 2 VIMSS3627886
Domain annotation for each sequence (and alignments):
>> VIMSS3627886
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.9 0.2 0.19 0.19 36 36 .. 71 71 .. 39 111 .. 0.45
2 ! 41.6 0.0 1.1e-14 1.1e-14 1 84 [] 169 247 .. 169 247 .. 0.90
Alignments for each domain:
== domain 1 score: -0.9 bits; conditional E-value: 0.19
C CS
DUF3298 36 g 36
VIMSS3627886 71 A 71
1 PP
== domain 2 score: 41.6 bits; conditional E-value: 1.1e-14
HHCBSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEHC CS
DUF3298 1 sdLFkpgsaylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipys 84
+dL++p+ +++l kl e++k++ + + la ++ + + + ++ ++nf l d+gl++ + +Yei+Py+ G p+ +ipy+
VIMSS3627886 169 EDLLRPE--KKAALEKLAHEAFKAWVTDSK---LANSVSEYEQAWPFKLTENFLLGDQGLILQYGEYEIGPYVVGLPRLVIPYD 247
5999999..899999999*******98666...6666666689***************************************96 PP
Or compare VIMSS3627886 to CDD or PaperBLAST