VIMSS3629062 has 224 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.3e-14 40.0 2.6 2.1e-13 37.4 0.5 2.2 2 VIMSS3629062
Domain annotation for each sequence (and alignments):
>> VIMSS3629062
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 2.5 0.1 0.016 0.016 11 41 .. 39 79 .. 33 115 .. 0.64
2 ! 37.4 0.5 2.1e-13 2.1e-13 19 80 .. 134 201 .. 116 203 .. 0.72
Alignments for each domain:
== domain 1 score: 2.5 bits; conditional E-value: 0.016
HHHHHHHHHHHHHHHT..........CH.TTS.HCCCCTTT CS
DUF3298 11 lqrlsklikeqikker..........ekqeedelaglpeps 41
++ +++ i ++i+k+ +kq ++++a+ +++
VIMSS3629062 39 IEWIDQVIDKEIRKDYadaltppsekQKQLNQTQAEGFNNW 79
55667777777777765555555544444444444444444 PP
== domain 2 score: 37.4 bits; conditional E-value: 2.1e-13
H....HHHHHHTCH.TTS.HCCCCTTT..TTTSS.TTTSSEEE.ETTEEEEEE-TTSSS-GGG-SEEEE CS
DUF3298 19 k....eqikkerekqeedelaglpeps..rddrlilgyqnfyl.tddglviyfppYeiaPyaaGipefe 80
+++k+e +kq ++ + ++++ +++++ +nfy+ +g+++ f++Ye+aPyaaG+++ e
VIMSS3629062 134 IngkmNALKEELWKQY-GYWCQEKDMQpyISKEDFKVSENFYInQSGGITFDFQLYELAPYAAGPVSLE 201
2455566677777666.55555555557778999*********556788****************9876 PP
Or compare VIMSS3629062 to CDD or PaperBLAST