VIMSS3713710 has 335 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-14 41.1 6.2 3.6e-14 39.9 0.1 3.2 2 VIMSS3713710
Domain annotation for each sequence (and alignments):
>> VIMSS3713710
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 1.9 1.9 0.026 0.026 20 68 .. 152 200 .. 22 204 .. 0.79
2 ! 39.9 0.1 3.6e-14 3.6e-14 2 83 .. 229 304 .. 228 305 .. 0.89
Alignments for each domain:
== domain 1 score: 1.9 bits; conditional E-value: 0.026
HHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEE.ETTEEEEEE-TTS CS
DUF3298 20 eqikkerekqeedelaglpepsrddrlilgyqnfyl.tddglviyfppYe 68
+q+k+ ek+ +++l+ l+e + + ++ yl +vi+f+ Y+
VIMSS3713710 152 NQLKTVLEKDYQESLETLKEGM-TLGISRTAETIYLgQRHNIVIFFQNYD 200
4555556666666666666553.333333344455535677799999986 PP
== domain 2 score: 39.9 bits; conditional E-value: 3.6e-14
HCBSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEEH CS
DUF3298 2 dLFkpgsaylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPyaaGipefeipy 83
dL++p +ls++++ ++++e++ ++++ +++++ ++f +tddg+ +++ppY ++P a+G+++ ++p+
VIMSS3713710 229 DLLSPA--KQVELSAILWSHYEQRNEPDANGKYSTFTP----KQDFYVSEDFLFTDDGVKFIYPPYALGPFAEGEISLTVPW 304
777777..788999999999999998888887777765....79*************************************9 PP
Or compare VIMSS3713710 to CDD or PaperBLAST