VIMSS5163524 has 210 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.6e-21 60.9 3.2 3e-20 59.4 1.0 2.2 2 VIMSS5163524
Domain annotation for each sequence (and alignments):
>> VIMSS5163524
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 1.4 0.0 0.035 0.035 10 65 .. 45 98 .. 37 105 .. 0.63
2 ! 59.4 1.0 3e-20 3e-20 2 82 .. 123 192 .. 122 194 .. 0.89
Alignments for each domain:
== domain 1 score: 1.4 bits; conditional E-value: 0.035
HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE- CS
DUF3298 10 ylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfp 65
++++++li eq +k e+ + +++ ++++++ + +++ + l+ + +i +p
VIMSS5163524 45 IIKTVNELIYEQTGKLLEQGY--KSPQMTVQGWYEIKTNEKGVLSLSIGNYTIAYP 98
577888889999888885322..334444444666666666666666666555554 PP
== domain 2 score: 59.4 bits; conditional E-value: 3e-20
HCBSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTTTTTSS.TTTSSEEEETTEEEEEE-TTSSS-GGG-SEEEEEE CS
DUF3298 2 dLFkpgsaylqrlsklikeqikkerekqeedelaglpepsrddrlilgyqnfyltddglviyfppYeiaPyaaGipefeip 82
+LFkpgs+y +lsk+i++qik++ ++l +++ i ++q++y+ d+ lviyf++Yei Pya G p f i
VIMSS5163524 123 ELFKPGSDYVGTLSKIIERQIKEREI-------PILG----EFKGIRPNQDYYIADKALVIYFQLYEITPYAFGFPMFPIS 192
7********************99883.......2233....3778899******************************996 PP
Or compare VIMSS5163524 to CDD or PaperBLAST