VIMSS5164928 has 300 amino acids
Query: DUF3298 [M=84]
Accession: PF11738.11
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.2e-24 72.1 3.4 4.7e-24 71.6 1.6 2.1 2 VIMSS5164928
Domain annotation for each sequence (and alignments):
>> VIMSS5164928
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.9 0.0 0.18 0.18 17 23 .. 131 137 .. 97 179 .. 0.56
2 ! 71.6 1.6 4.7e-24 4.7e-24 2 83 .. 201 286 .. 200 287 .. 0.95
Alignments for each domain:
== domain 1 score: -0.9 bits; conditional E-value: 0.18
HHHHHHH CS
DUF3298 17 likeqik 23
++ e++
VIMSS5164928 131 KLYEEFM 137
1122222 PP
== domain 2 score: 71.6 bits; conditional E-value: 4.7e-24
HCBSSCT.HHHHHHHHHHHHHHHHTCH.TTS.HCCCCTTT....TTTSS.TTTSSEEEETTEE.EEEE-TTSSS-GGG-SEEEEEEH CS
DUF3298 2 dLFkpgsaylqrlsklikeqikkerekqeedelaglpeps....rddrlilgyqnfyltddgl.viyfppYeiaPyaaGipefeipy 83
LFk++s y++ +s++ik q++++++ ++ ++ +++++ +++i+++qnfy+t++g vi f++Ye++P+++Gi+efeip
VIMSS5164928 201 SLFKDNS-YIEIISENIKDQMRERMKADDGFIYWVDVDENeefiEPFDKISPNQNFYITEEGKlVISFDKYEVGPGYMGIQEFEIPT 286
59****6.*****************9999999999999999***9***************9999**********************6 PP
Or compare VIMSS5164928 to CDD or PaperBLAST